skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.


Search for: All records

Creators/Authors contains: "Li, Shu"

Note: When clicking on a Digital Object Identifier (DOI) number, you will be taken to an external site maintained by the publisher. Some full text articles may not yet be available without a charge during the embargo (administrative interval).
What is a DOI Number?

Some links on this page may take you to non-federal websites. Their policies may differ from this site.

  1. Abstract BackgroundPrescribed fires play a critical role in reducing the intensity and severity of future wildfires by systematically and widely consuming accumulated vegetation fuel. While the current probability of prescribed fire escape in the United States stands very low, their consequential impact, particularly the large wildfires they cause, raises substantial concerns. The most direct way of understanding this trade-off between wildfire risk reduction and prescribed fire escapes is to explore patterns in the historical prescribed fire records. This study investigates the spatiotemporal patterns of escaped prescribed fires in California from 1991 to 2020, offering insights for resource managers in developing effective forest management and fuel treatment strategies. ResultsThe results reveal that the months close to the beginning and end of the wildfire season, namely May, June, September, and November, have the highest frequency of escaped fires. Under similar environmental conditions, areas with more records of prescribed fire implementation tend to experience fewer escapes. The findings revealed the vegetation types most susceptible to escaped prescribed fires. Areas with tree cover ranging from 20 to 60% exhibited the highest incidence of escapes compared to shrubs and grasslands. Among all the environmental conditions analyzed, wind speed stands out as the predominant factor that affects the risk of prescribed fire escaping. ConclusionsThese findings mark an initial step in identifying high-risk areas and periods for prescribed fire escapes. Understanding these patterns and the challenges of quantifying escape rates can inform more effective landscape management practices. 
    more » « less
  2. Set representation has become ubiquitous in deep learning for modeling the inductive bias of neural networks that are insensitive to the input order. DeepSets is the most widely used neural network architecture for set representation. It involves embedding each set element into a latent space with dimension L, followed by a sum pooling to obtain a whole-set embedding, and finally mapping the whole-set embedding to the output. In this work, we investigate the impact of the dimension L on the expressive power of DeepSets. Previous analyses either oversimplified high-dimensional features to be one-dimensional features or were limited to analytic activations, thereby diverging from practical use or resulting in L that grows exponentially with the set size N and feature dimension D. To investigate the minimal value of L that achieves sufficient expressive power, we present two set-element embedding layers: (a) linear + power activation (LP) and (b) linear + exponential activations (LE). We demonstrate that L being poly(N,D) is sufficient for set representation using both embedding layers. We also provide a lower bound of L for the LP embedding layer. Furthermore, we extend our results to permutation-equivariant set functions and the complex field. 
    more » « less
  3. ABSTRACT Although the frequency of ancient hybridization across the Tree of Life is greater than previously thought, little work has been devoted to uncovering the extent, timeline, and geographic and ecological context of ancient hybridization. Using an expansive new dataset of nuclear and chloroplast DNA sequences, we conducted a multifaceted phylogenomic investigation to identify ancient reticulation in the early evolution of oaks (Quercus). We document extensive nuclear gene tree and cytonuclear discordance among major lineages ofQuercusand relatives in Quercoideae. Our analyses recovered clear signatures of gene flow against a backdrop of rampant incomplete lineage sorting, with gene flow most prevalent among major lineages ofQuercusand relatives in Quercoideae during their initial radiation, dated to the Early‐Middle Eocene. Ancestral reconstructions including fossils suggest ancestors ofCastanea + Castanopsis,Lithocarpus, and the Old World oak clade probably co‐occurred in North America and Eurasia, while the ancestors ofChrysolepis, Notholithocarpus, and the New World oak clade co‐occurred in North America, offering ample opportunity for hybridization in each region. Our study shows that hybridization—perhaps in the form of ancient syngameons like those seen today—has been a common and important process throughout the evolutionary history of oaks and their relatives. Concomitantly, this study provides a methodological framework for detecting ancient hybridization in other groups. 
    more » « less
  4. Abstract Due to the mixed distribution of buildings and vegetation, wildland-urban interface (WUI) areas are characterized by complex fuel distributions and geographical environments. The behavior of wildfires occurring in the WUI often leads to severe hazards and significant damage to man-made structures. Therefore, WUI areas warrant more attention during the wildfire season. Due to the ever-changing dynamic nature of California’s population and housing, the update frequency and resolution of WUI maps that are currently used can no longer meet the needs and challenges of wildfire management and resource allocation for suppression and mitigation efforts. Recent developments in remote sensing technology and data analysis algorithms pose new opportunities for improving WUI mapping methods. WUI areas in California were directly mapped using building footprints extracted from remote sensing data by Microsoft along with the fuel vegetation cover from the LANDFIRE dataset in this study. To accommodate the new type of datasets, we developed a threshold criteria for mapping WUI based on statistical analysis, as opposed to using more ad-hoc criteria as used in previous mapping approaches. This method removes the reliance on census data in WUI mapping, and does not require the calculation of housing density. Moreover, this approach designates the adjacent areas of each building with large and dense parcels of vegetation as WUI, which can not only refine the scope and resolution of the WUI areas to individual buildings, but also avoids zoning issues and uncertainties in housing density calculation. Besides, the new method has the capability of updating the WUI map in real-time according to the operational needs. Therefore, this method is suitable for local governments to map local WUI areas, as well as formulating detailed wildfire emergency plans, evacuation routes, and management measures. 
    more » « less
  5. Abstract Understanding how cortical circuits generate complex behavior requires investigating the cell types that comprise them. Functional differences across pyramidal neuron (PyN) types have been observed within cortical areas, but it is not known whether these local differences extend throughout the cortex, nor whether additional differences emerge when larger-scale dynamics are considered. We used genetic and retrograde labeling to target pyramidal tract, intratelencephalic and corticostriatal projection neurons and measured their cortex-wide activity. Each PyN type drove unique neural dynamics, both at the local and cortex-wide scales. Cortical activity and optogenetic inactivation during an auditory decision task revealed distinct functional roles. All PyNs in parietal cortex were recruited during perception of the auditory stimulus, but, surprisingly, pyramidal tract neurons had the largest causal role. In frontal cortex, all PyNs were required for accurate choices but showed distinct choice tuning. Our results reveal that rich, cell-type-specific cortical dynamics shape perceptual decisions. 
    more » « less
  6. Abstract Past studies reported a drastic growth in the wildland–urban interface (WUI), the location where man‐made structures meet or overlap wildland vegetation. Fighting fire is difficult in the WUI due to the combination of wildland and structural fuels, and therefore, WUI areas are characterized by frequent damage and loss of structures from wildfires. Recent wildland fire policy has targeted fire prevention, evacuation planning, fuel treatment, and home hardening in WUI areas. Therefore, it is important to understand the occurrence of wildfire events relative to the location of the WUI. In this work, we have reported the occurrences of wildfires with respect to the WUI and quantified how much of the WUI is on complex topography in California, which intensifies fire behavior and complicates fire suppression. We have additionally analyzed the relative importance of WUI‐related parameters, such as housing density, vegetation density, and distance to wildfires, as well as topographic factors, such as slope, elevation, aspect, and surface roughness, on the occurrence of large and small wildfires and the burned area of large wildfires near the WUI. We found that a very small percentage of wildfire ignition points and large wildfire‐burned areas (>400 ha or 1000 acres) were located in the WUI areas. A small percentage of large wildfires were encountered in WUI (3%), and the WUI area accounted for only 4% of the area burned, which increased to 5% and 56%, respectively, outside WUI (5‐km buffer from WUI). Similarly, 66% of fires ignited outside WUI, whereas only 3.6% ignited within WUI. Results from this study have implications for fuel management and infrastructure hardening, as well as for fire suppression and community response. 
    more » « less